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EMERGING RESEARCH FRONTS

Research Front Map - April 2008

This Research Front on HAPLOTYPE TAG SNPS from the field of Computer Sciences was selected for mapping from the list of Emerging Research Fronts for April 2008 (data from the sixth bimonthly period of 2007). The map is a diagrammatic representation of the 15 core papers comprising the front. Each circle represents a highly cited paper whose bibliographic information is displayed when the user clicks on the circle. The lines between circles represent the strongest co-citation links for each paper (that is, indicating that the papers are frequently cited together). Papers close to each other on the map are generally more highly co-cited. The most recent paper(s) are indicated in pink.
 

Schaid-2002 Zaykin-2002 Gabriel-2002 Ke-2003 Zhang-2003 Stram-2003 Dudbridge-2003 Gibbs-2003 Carlson-2004 Barrett-2005 Hinds-2005 Altshuler-2005 deBakker-2005 Barrett-2006 Pe

 HAPLOTYPE TAG SNPS  
 

 Core Papers 


Label: Gabriel-2002
Title: The structure of haplotype blocks in the human genome
Journal: SCIENCE, 296 (5576): 2225-2229 JUN 21 2002
Citations: 1279
Authors: Gabriel, SB;Schaffner, SF;Nguyen, H;Moore, JM;Roy, J;Blumenstiel, B;Higgins, J;DeFelice, M;Lochner, A;Faggart, M;Liu-Cordero, SN;Rotimi, C;Adeyemo, A;Cooper, R;Ward, R;Lander, ES;Daly, MJ;Altshuler, D
Addresses:
Whitehead MIT Ctr Genome Res, Cambridge, MA 02139 USA
Whitehead MIT Ctr Genome Res, Cambridge, MA 02139 USA
MIT, Dept Biol, Cambridge, MA 02142 USA
Howard Univ, Natl Human Genome Ctr, Washington, DC 20059 USA
Univ Ibadan, Coll Med, Dept Pediat, Ibadan, Nigeria
Loyola Univ, Sch Med, Dept Prevent Med & Epidemiol, Maywood, IL 60143 USA
Univ Oxford, Inst Biol Anthropol, Oxford OX2 6QS, England
Harvard Univ, Sch Med, Dept Genet, Boston, MA 02114 USA
Harvard Univ, Sch Med, Dept Med, Boston, MA 02114 USA
Massachusetts Gen Hosp, Dept Mol Biol, Boston, MA 02114 USA
Massachusetts Gen Hosp, Diabet Unit, Boston, MA 02114 USA


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Label: Barrett-2005
Title: Haploview: analysis and visualization of LD and haplotype maps
Journal: BIOINFORMATICS, 21 (2): 263-265 JAN 15 2005
Citations: 961
Authors: Barrett, JC;Fry, B;Maller, J;Daly, MJ
Addresses:
Whitehead Inst Biomed Res, 9 Cambridge Ctr, Cambridge, MA 02142 USA
Whitehead Inst Biomed Res, Cambridge, MA 02142 USA
MIT, Media Lab, Cambridge, MA 02139 USA
Harvard Univ, Broad Inst, Cambridge, MA 02138 USA
MIT, Broad Inst, Cambridge, MA 02139 USA


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Label: Altshuler-2005
Title: A haplotype map of the human genome
Journal: NATURE, 437 (7063): 1299-1320 OCT 27 2005
Citations: 942
Authors: Altshuler, D;Brooks, LD;Chakravarti, A;Collins, FS;Daly, MJ;Donnelly, P;Int HapMap Consortium
Addresses:
Harvard Univ, Broad Inst, 1 Kendall Sq, Cambridge, MA 02139 USA
Harvard Univ, Broad Inst, Cambridge, MA 02139 USA
MIT, Cambridge, MA 02139 USA
Massachusetts Gen Hosp, Boston, MA 02114 USA
Harvard Univ, Sch Med, Simches Res Ctr, Boston, MA 02114 USA
Johns Hopkins Univ, Sch Med, McKusick Nathans Inst Genet Med, Baltimore, MD 21205 USA


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Label: Gibbs-2003
Title: The International HapMap Project
Journal: NATURE, 426 (6968): 789-796 DEC 18 2003
Citations: 842
Authors: Gibbs, RA;Belmont, JW;Hardenbol, P;Willis, TD;Yu, FL;Yang, HM;Ch'ang, LY;Huang, W;Liu, B;Shen, Y;Tam, PKH;Tsui, LC;Waye, MMY;Wong, JTF;Zeng, CQ;Zhang, QR;Chee, MS;Galver, LM;Kruglyak, S;Murray, SS;Oliphant, AR;Montpetit, A;Hudson, TJ;Chagnon, F;Ferretti, V;Leboeuf, M;Phillips, MS;Verner, A;Kwok, PY;Duan, SH;Lind, DL;Miller, RD;Rice, JP;Saccone, NL;Taillon-Miller, P;Xiao, M;Nakamura, Y;Sekine, A;Sorimachi, K;Tanaka, T;Tanaka, Y;Tsunoda, T;Yoshino, E;Bentley, DR;Deloukas, P;Hunt, S;Powell, D;Altshuler, D;Gabriel, SB;Qiu, RZ;Ken, A;Dunston, GM;Kato, K;Niikawa, N;Knoppers, BM;Foster, MW;Clayton, EW;Wang, VO;Watkin, J;Gibbs, RA;Belmont, JW;Sodergren, E;Weinstock, GM;Wilson, RK;Fulton, LL;Rogers, J;Birren, BW;Han, H;Wang, HG;Godbout, M;Wallenburg, JC;L'Archeveque, P;Bellemare, G;Todani, K;Fujita, T;Tanaka, S;Holden, AL;Lai, EH;Collins, FS;Brooks, LD;McEwen, JE;Guyer, MS;Jordan, E;Peterson, JL;Spiegel, J;Sung, LM;Zacharia, LF;Kennedy, K;Dunn, MG;Seabrook, R;Shillito, M;Skene, B;Stewart, JG;Valle, DL;Clayton, EW;Jorde, LB;Belmont, JW;Chakravarti, A;Cho, MK;Duster, T;Foster, MW;Jasperse, M;Knoppers, BM;Kwok, PY;Licinio, J;Long, JC;Marshall, PA;Ossorio, PN;Wang, VO;Rotimi, CN;Royal, CDM;Spallone, P;Terry, SF;Lander, ES;Lai, EH;Nickerson, DA;Abecasis, GR;Altshuler, D;Bentley, DR;Boehnke, M;Cardon, LR;Daly, MJ;Deloukas, P;Douglas, JA;Gabriel, SB;Hudson, RR;Hudson, TJ;Kruglyak, L;Kwok, PY;Nakamura, Y;Nussbaum, RL;Royal, CDM;Schaffner, SF;Sherry, ST;Stein, LD;Tanaka, T;Int HapMap Consortium
Addresses:
Baylor Coll Med, Dept Mol & Human Genet, Human Genome Sequencing Ctr, 1 Baylor Plaza, Houston, TX 77030 USA
Baylor Coll Med, Dept Mol & Human Genet, Human Genome Sequencing Ctr, Houston, TX 77030 USA
ParAllele Biosci, San Francisco, CA 94080 USA
Chinese Acad Sci, Beijing Genom Inst, Beijing 100300, Peoples R China
Acad Sinica, Inst Biomed Sci, Taipei 115, Taiwan
Chinese Natl Human Genome Ctr Shanghai, Shanghai 201203, Peoples R China
Chinese Natl Human Genome Ctr Beijing, Beijing Econ & Technol Dev Zone, Beijing 100176, Peoples R China
Univ Hong Kong, Genome Res Ctr, Pokfulam, Hong Kong, Peoples R China
Univ Hong Kong, Hong Kong, Hong Kong, Peoples R China
Chinese Univ Hong Kong, Dept Biochem, Shatin, Hong Kong, Peoples R China
Hong Kong Univ Sci & Technol, Dept Biochem, Knowloon, Hong Kong, Peoples R China
Illumina, San Diego, CA 92121 USA
McGill Univ, Montreal, PQ H3A 1A4, Canada
Genome Quebec Innovat Ctr, Montreal, PQ H3A 1A4, Canada
Univ Calif San Francisco, Cardiovasc Res Inst, San Francisco, CA 94143 USA
Washington Univ, Sch Med, St Louis, MO 63110 USA
Univ Tokyo, Inst Med Sci, Minato Ku, Tokyo 1088639, Japan
RIKEN, SNP Res Ctr, Tsurumi Ku, Kanagawa 2300045, Japan
RIKEN, Technol Transfer & Res Coordinat Div, Wako, Saitama 35101, Japan
Wellcome Trust Sanger Inst, Cambridge CB10 1SA, England
Whitehead Inst MIT, Ctr Genome Res, Cambridge, MA 02139 USA
Massachusetts Gen Hosp, Boston, MA 02114 USA
Beijing Normal Univ, Beijing 100875, Peoples R China
Hlth Sci Univ Hokkaido, Ezuko Inst Dev Disabil, Kumamoto 575, Japan
Shinshu Univ, Sch Med, Dept Med Genet, Matsumoto, Nagano 3908621, Japan
Univ Tsukuba, Eubios Eth Inst, Tsukuba, Ibaraki 3058691, Japan
Howard Univ, Natl Human Genome Ctr, Washington, DC 20059 USA
Univ Ibadan, Coll Med, Ibadan, Oyo, Nigeria
Case Western Reserve Univ, Sch Med, Dept Bioeth, Cleveland, OH 44106 USA
Univ Utah, Dept Human Genet, Eccles Inst Human Genet, Salt Lake City, UT 84112 USA
Cold Spring Harbor Lab, Cold Spring Harbor, NY 11724 USA
Johns Hopkins Univ, Sch Med, McKusick Nathans Inst Genet Med, Baltimore, MD 21287 USA
Univ Oxford, Dept Stat, Oxford OX1 3TG, England
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England
Univ Michigan, Dept Biostat, Ctr Stat Genet, Ann Arbor, MI 48109 USA
N Carolina State Univ, Bioinformat Res Ctr, Raleigh, NC 27695 USA
NIH, NHGRI, Bethesda, MD 20892 USA
NIH, Natl Lib Med, Natl Ctr Biotechnol Informat, Bethesda, MD 20894 USA
Chinese Acad Social Sci, Ctr Appl Eth, Beijing 100054, Peoples R China
Genet Interest Grp, London N1 3QP, England
Kyoto Univ, Inst Res Human, Sakyo Ku, Kyoto 6068501, Japan
Nagasaki Univ, Grad Sch Biomed Sci, Dept Human Genet, Nagasaki 8528523, Japan
Univ Montreal, Publ Law Res Ctr, CRDP, Montreal, PQ H3C 3J7, Canada
Univ Oklahoma, Dept Anthropol, Norman, OK 73019 USA
Vanderbilt Univ, Ctr Genet & Hlth Policy, Nashville, TN 37232 USA
Wellcome Trust Res Labs, London NW1 2BE, England
Washington Univ, Sch Med, Genome Sequencing Ctr, St Louis, MO 63108 USA
Whitehead Inst MIT, Ctr Genome Res, Cambridge Ctr 9, Cambridge, MA 02142 USA
Chinese Acad Sci, Beijing 100864, Peoples R China
Chinese Minist Sci & Technol, Beijing 100862, Peoples R China
Genome Canada, Ottawa, ON K2P 1P1, Canada
McGill Univ, Off Technol Transfer, Montreal, PQ H3A 2A7, Canada
Genome Quebec, Montreal, PQ H3B 1S6, Canada
Minist Educ Culture Sports Sci & Technol, Chiyoda Ku, Tokyo, Japan
Hiraka & Associates, Minato Ku, Tokyo 1050001, Japan
SNP Consortium, Deerfield, IL 60015 USA
GlaxoSmithKline, Res Triangle Pk, NC 27709 USA
NIH, NHGRI, Bethesda, MD 20892 USA
Fdn Natl Inst Hlth, Bethesda, MD 20892 USA
NIH, Off Technol Transfer, Rockville, MD 20852 USA
Univ Maryland, Sch Law, Baltimore, MD 21201 USA
Exchange House, London EC2A 2HS, England
Johns Hopkins Univ, Sch Med, Howard Hughes Med Inst, Baltimore, MD 21205 USA
Johns Hopkins Univ, Sch Med, McKusick Nathans Inst Genet Med, Baltimore, MD 21205 USA
Stanford Ctr Biomed Eth, Palo Alto, CA 94304 USA
NYU, Dept Sociol, New York, NY 10003 USA
Univ Calif Berkeley, Dept Sociol, Berkeley, CA 94720 USA
Univ New Mexico, Hlth Sci Ctr, Gallup, NM 87301 USA
Univ Calif Los Angeles, Sch Med, Los Angeles, CA 90095 USA
Univ Michigan, Dept Human Genet, Ann Arbor, MI 48109 USA
Univ Wisconsin, Sch Law, Madison, WI 53706 USA
Univ London London Sch Econ & Polit Sci, London WC2A 2AE, England
Genet Alliance, Washington, DC 20008 USA
Univ Washington, Dept Genome Sci, Washington, DC 98125 USA
Univ Chicago, Dept Ecol & Evolut, Chicago, IL 60637 USA
Fred Hutchinson Canc Res Ctr, Seattle, WA 98109 USA
NIH, NHGRI, Bethesda, MD 20892 USA


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Label: Schaid-2002
Title: Score tests for association between traits and haplotypes when linkage phase is ambiguous
Journal: AMER J HUM GENET, 70 (2): 425-434 FEB 2002
Citations: 530
Authors: Schaid, DJ;Rowland, CM;Tines, DE;Jacobson, RM;Poland, GA
Addresses:
Mayo Clin & Mayo Fdn, Dept Hlth Sci Res, Biostat Sect, Harwick 775, Rochester, MN 55905 USA
Mayo Clin & Mayo Fdn, Dept Hlth Sci Res, Biostat Sect, Rochester, MN 55905 USA
Mayo Clin & Mayo Fdn, Dept Med Genet, Rochester, MN 55905 USA
Mayo Clin & Mayo Fdn, Dept Pediat, Rochester, MN 55905 USA
Mayo Clin & Mayo Fdn, Mayo Vaccine Res Grp, Rochester, MN 55905 USA


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Label: Dudbridge-2003
Title: Pedigree disequilibrium tests for multilocus haplotypes
Journal: GENET EPIDEMIOL, 25 (2): 115-121 SEP 2003
Citations: 385
Authors: Dudbridge, F
Addresses:
MRC, Human Genome Mapping Project Resource Ctr, Cambridge CB10 1SB, England
MRC, Human Genome Mapping Project Resource Ctr, Cambridge CB10 1SB, England


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Label: Hinds-2005
Title: Whole-genome patterns of common DNA variation in three human populations
Journal: SCIENCE, 307 (5712): 1072-1079 FEB 18 2005
Citations: 380
Authors: Hinds, DA;Stuve, LL;Nilsen, GB;Halperin, E;Eskin, E;Ballinger, DG;Frazer, KA;Cox, DR
Addresses:
Perlegen Sci Inc, 2021 Stierlin Court, Mountain View, CA 94043 USA
Perlegen Sci Inc, Mountain View, CA 94043 USA
Int Comp Sci Inst, Berkeley, CA 94704 USA
Univ Calif San Diego, Dept Comp Sci & Engn, La Jolla, CA 92093 USA


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Label: Carlson-2004
Title: Selecting a maximally informative set of single-nucleotide polymorphisms for association analyses using linkage disequilibrium
Journal: AMER J HUM GENET, 74 (1): 106-120 JAN 2004
Citations: 330
Authors: Carlson, CS;Eberle, MA;Rieder, MJ;Yi, Q;Kruglyak, L;Nickerson, DA
Addresses:
Univ Washington, Med Ctr, Dept Genome Sci, 1705 NE Pacific St,Room K-322, Seattle, WA 98195 USA
Univ Washington, Med Ctr, Dept Genome Sci, Seattle, WA 98195 USA
Fred Hutchinson Canc Res Ctr, Div Human Biol, Seattle, WA 98104 USA
Howard Hughes Med Inst, Seattle, WA USA


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Label: Zaykin-2002
Title: Testing association of statistically inferred haplotypes with discrete and continuous traits in samples of unrelated individuals
Journal: HUM HERED, 53 (2): 79-91 2002
Citations: 259
Authors: Zaykin, DV;Westfall, PH;Young, SS;Karnoub, MA;Wagner, MJ;Ehm, MG
Addresses:
GlaxoSmithKline Inc, Dept Populat Genet, Discovery Genet, 5 Moore Dr,POB 13398, Res Triangle Pk, NC 27709 USA
GlaxoSmithKline Inc, Dept Populat Genet, Discovery Genet, Res Triangle Pk, NC 27709 USA
GlaxoSmithKline Inc, Stat Res Unit, Res Triangle Pk, NC 27709 USA
Texas Tech Univ, Lubbock, TX 79409 USA


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Label: deBakker-2005
Title: Efficiency and power in genetic association studies
Journal: NAT GENET, 37 (11): 1217-1223 NOV 2005
Citations: 197
Authors: de Bakker, PIW;Yelensky, R;Pe'er, I;Gabriel, SB;Daly, MJ;Altshuler, D
Addresses:
Massachusetts Gen Hosp, Ctr Human Genet Res, 185 Cambridge St,CPZN-6818, Boston, MA 02114 USA
Massachusetts Gen Hosp, Ctr Human Genet Res, Boston, MA 02114 USA
Massachusetts Gen Hosp, Dept Mol Biol, Boston, MA 02114 USA
Harvard Univ, Sch Med, Dept Genet, Boston, MA USA
Harvard Univ, Broad Inst, Program Med & Populat Genet, Cambridge, MA 02138 USA
MIT, Harvard MIT Div Hlth Sci & Technol, Cambridge, MA 02139 USA
Harvard Univ, Sch Med, Dept Med, Boston, MA USA
Massachusetts Gen Hosp, Diabet Unit, Boston, MA 02114 USA


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Label: Stram-2003
Title: Choosing haplotype-tagging SNPS based on unphased genotype data using a preliminary sample of unrelated subjects with an example from the multiethnic cohort study
Journal: HUM HERED, 55 (1): 27-36 2003
Citations: 195
Authors: Stram, DO;Haiman, CA;Hirschhorn, JN;Altshuler, D;Kolonel, LN;Henderson, BE;Pike, MC
Addresses:
Univ So Calif, Dept Prevent Med, Keck Sch Med, 1540 Alcazar St,Suite 220, Los Angeles, CA 90033 USA
Univ So Calif, Dept Prevent Med, Keck Sch Med, Los Angeles, CA 90033 USA
MIT, Whitehead Inst, Ctr Genome Res, Cambridge, MA 02139 USA
Harvard Univ, Sch Med, Dept Genet, Cambridge, MA 02138 USA
Harvard Univ, Sch Med, Dept Med, Cambridge, MA 02138 USA
Childrens Hosp, Div Genet, Boston, MA 02115 USA
Childrens Hosp, Div Endocrinol, Boston, MA 02115 USA
Massachusetts Gen Hosp, Dept Mol Biol, Boston, MA 02114 USA
Massachusetts Gen Hosp, Diabet Unit, Boston, MA 02114 USA
Univ Hawaii, Canc Res Ctr, Honolulu, HI 96822 USA


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Label: Ke-2003
Title: Efficient selective screening of haplotype tag SNPs
Journal: BIOINFORMATICS, 19 (2): 287-288 JAN 22 2003
Citations: 91
Authors: Ke, XY;Cardon, LR
Addresses:
Univ Oxford, Wellcome Trust Ctr Human Genet, Roosevelt Dr, Oxford OX3 7BN, England
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England


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Label: Zhang-2003
Title: HaploBlockFinder: haplotype block analyses
Journal: BIOINFORMATICS, 19 (10): 1300-1301 JUL 1 2003
Citations: 54
Authors: Zhang, K;Jin, L
Addresses:
Univ Cincinnati, Dept Environm Hlth, Ctr Genome Informat, Cincinnati, OH 45267 USA
Univ Cincinnati, Dept Environm Hlth, Ctr Genome Informat, Cincinnati, OH 45267 USA


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Label: Pe'er-2006
Title: Evaluating and improving power in whole-genome association studies using fixed marker sets
Journal: NAT GENET, 38 (6): 663-667 JUN 2006
Citations: 48
Authors: Pe'er, I;de Bakker, PIW;Maller, J;Yelensky, R;Altshuler, D;Daly, MJ
Addresses:
Massachusetts Gen Hosp, Ctr Human Genet Res, Boston, MA 02114 USA
Massachusetts Gen Hosp, Ctr Human Genet Res, Boston, MA 02114 USA
Massachusetts Gen Hosp, Dept Mol Biol, Boston, MA 02114 USA
Massachusetts Gen Hosp, Diabet Unit, Boston, MA 02114 USA
MIT, Broad Inst, Cambridge, MA 02142 USA
Harvard Univ, Cambridge, MA 02142 USA
Harvard Univ, Sch Med, Dept Genet, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Med, Boston, MA 02115 USA
Harvard Mit Div Hlth Sci & Technol, Cambridge, MA 02139 USA


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Label: Barrett-2006
Title: Evaluating coverage of genome-wide association studies
Journal: NAT GENET, 38 (6): 659-662 JUN 2006
Citations: 45
Authors: Barrett, JC;Cardon, LR
Addresses:
Univ Oxford, Wellcome Trust Ctr Human Genet, Roosevelt Dr, Oxford OX3 7BN, England
Univ Oxford, Wellcome Trust Ctr Human Genet, Oxford OX3 7BN, England


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