As part of this bimonthly processing,
ScienceWatch.com selects the Research Fronts with the largest absolute
increase in size in each of the 22 major
fields covered by
Essential Science IndicatorsSM
from Thomson
Reuters. The size of a research front is determined by the number of
core papers it contains. This Research Front on PROTEIN SUBCELLULAR
LOCALIZATION from the field of
Computer Science was
selected for mapping from the list of Top Topics for October 2008
(data from the third bimonthly period of
2008). The map is a diagrammatic
representation of the 40 core papers comprising the front
in
Computer Science.
Each circle
represents a highly cited paper whose bibliographic information is displayed
when the user clicks on the circle. The lines between circles represent the
strongest co-citation links for each paper (that is, indicating that the papers
are frequently cited together). Papers close to each other on the map are
generally more highly co-cited. The most recent paper(s) are indicated in pink.
For this particular map, annotations have been added representing the main
research themes. These appear as labels attached to specific regions on the
maps.
Label: Chou-2004 Title: Structural bioinformatics and its impact to biomedical science Journal: CURR MEDICINAL CHEM, 11 (16): 2105-2134 AUG 2004 Citations: 108 Authors: Chou, KC Addresses:
Shanghai Jiao Tong Univ, Life Sci Res Ctr, Shanghai 200030, Peoples R China
Tianjin Inst Bioinformat & Drug Discovery, Tianjin 300074, Peoples R China
Label: Park-2003 Title: Prediction of protein subcellular locations by support vector machines using compositions of amino acids and amino acid pairs Journal: BIOINFORMATICS, 19 (13): 1656-1663 SEP 1 2003 Citations: 79 Authors: Park, KJ;Kanehisa, M Addresses:
Kyoto Univ, Chem Res Inst, Bioinformat Ctr, Kyoto 6110011, Japan
Kyoto Univ, Chem Res Inst, Bioinformat Ctr, Kyoto 6110011, Japan
Label: Chou-2005 Title: Using amphiphilic pseudo amino acid composition to predict enzyme subfamily classes Journal: BIOINFORMATICS, 21 (1): 10-19 JAN 1 2005 Citations: 78 Authors: Chou, KC Addresses:
Gordon Life Sci Inst, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Label: Xiao-2005 Title: Using complexity measure factor to predict protein subcellular location Journal: AMINO ACIDS, 28 (1): 57-61 FEB 2005 Citations: 68 Authors: Xiao, X;Shao, S;Ding, Y;Huang, Z;Huang, Y;Chou, KC Addresses:
Gordon Life Sci Inst, 13784 Torrey Mar Dr, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Tianjin Inst Bioinformat & Drug Discovery, Tianjin, Peoples R China
Shanghai Jiao Tong Univ, Shanghai 200030, Peoples R China
Jing Zhen Ceram Inst, Dept Comp, Jing De Zhen, Peoples R China
Donghua Univ, Coll Informat Sci & Technol, Shanghai, Peoples R China
Label: Chou-2006 Title: Hum-PLoc: A novel ensemble classifier for predicting human protein subcellular localization Journal: BIOCHEM BIOPHYS RES COMMUN, 347 (1): 150-157 AUG 18 2006 Citations: 47 Authors: Chou, KC;Shen, HB Addresses:
Gordon Life Sci Inst, 13784 Torrey Del Mar Dr, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, Shanghai 200030, Peoples R China
Label: Chou-2006 Title: Predicting eukaryotic protein subcellular location by fusing optimized evidence-theoretic K-Nearest Neighbor classifiers Journal: J PROTEOME RES, 5 (8): 1888-1897 AUG 4 2006 Citations: 43 Authors: Chou, KC;Shen, HB Addresses:
Gordon Life Sci Inst, 13784 Torrey Del Mar Dr, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, Shanghai 200030, Peoples R China
Label: Guo-2006 Title: Classifying G protein-coupled receptors and nuclear receptors on the basis of protein power spectrum from fast Fourier transform Journal: AMINO ACIDS, 30 (4): 397-402 JUN 2006 Citations: 39 Authors: Guo, YZ;Li, M;Lu, M;Wen, Z;Wang, K;Li, G;Wu, J Addresses:
Sichuan Univ, Coll Chem, Chengdu 610064, Peoples R China
Sichuan Univ, Coll Chem, Chengdu 610064, Peoples R China
Hunan Univ, State Key Lab Chemo Biosensing & Chemometr, Changsha, Peoples R China
Label: Chou-2005 Title: Predicting protein localization in budding yeast Journal: BIOINFORMATICS, 21 (7): 944-950 APR 1 2005 Citations: 38 Authors: Chou, KC;Cai, YD Addresses:
Gordon Life Sci Inst, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Shanghai Jiao Tong Univ, Shanghai 200030, Peoples R China
Tianjin Inst Bioinformat & Drug Discovery, Tianjin, Peoples R China
UMIST, Biomol Sci Dept, Manchester M60 1QD, Lancs, England
Label: Xiao-2006 Title: Using pseudo amino acid composition to predict protein structural classes: Approached with complexity measure factor Journal: J COMPUT CHEM, 27 (4): 478-482 MAR 2006 Citations: 37 Authors: Xiao, X;Shao, SH;Huang, ZD;Chou, KC Addresses:
Donghua Univ, Inst Informat, Shanghai 200051, Peoples R China
Donghua Univ, Inst Informat, Shanghai 200051, Peoples R China
Jing De Zhen Ceram Inst, Dept Comp, Jing De Zhen 33300, Peoples R China
Gordon Life Sci Inst, San Diego, CA 92130 USA
Label: Chen-2006 Title: Predicting protein structural class with pseudo-amino acid composition and support vector machine fusion network Journal: ANAL BIOCHEM, 357 (1): 116-121 OCT 1 2006 Citations: 36 Authors: Chen, C;Zhou, XB;Tian, YX;Zou, XY;Cai, PX Addresses:
Sun Yat Sen Univ, Sch Chem & Chem Engn, Guangzhou 510275, Peoples R China
Sun Yat Sen Univ, Sch Chem & Chem Engn, Guangzhou 510275, Peoples R China
Label: Chou-2007 Title: Euk-mPLoc: A fusion classifier for large-scale eukaryotic protein subcellular location prediction by incorporating multiple sites Journal: J PROTEOME RES, 6 (5): 1728-1734 2007 Citations: 36 Authors: Chou, KC;Shen, HB Addresses:
Gordon Life Sci Inst, 13784 Torrey Del Mar Dr, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, Shanghai 200030, Peoples R China
So Yangtze Univ, Sch Informat Engn, Wuxi, Peoples R China
Label: Chou-2007 Title: Large-scale plant protein subcellular location prediction Journal: J CELL BIOCHEM, 100 (3): 665-678 FEB 15 2007 Citations: 35 Authors: Chou, KC;Shen, HB Addresses:
Gordon Life Sci Inst, 13784 Torrey Del Mar Dr, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, Shanghai 200030, Peoples R China
Label: Shen-2007 Title: Hum-mPLoc: An ensemble classifier for large-scale human protein subcellular location prediction by incorporating samples with multiple sites Journal: BIOCHEM BIOPHYS RES COMMUN, 355 (4): 1006-1011 APR 20 2007 Citations: 35 Authors: Shen, HB;Chou, KC Addresses:
Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USA
Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Label: Chou-2007 Title: Signal-CF: A subsite-coupled and window-fusing approach for predicting signal peptides Journal: BIOCHEM BIOPHYS RES COMMUN, 357 (3): 633-640 JUN 8 2007 Citations: 32 Authors: Chou, KC;Shen, HB Addresses:
Gordan Life Sci Inst, 13784 Torrey Mar Dr, San Diego, CA 92130 USA
Gordan Life Sci Inst, San Diego, CA 92130 USA
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, Shanghai 200030, Peoples R China
So Yangtze Univ, Sch Informat Engn, Wuxi, Peoples R China
Label: Du-2006 Title: Prediction of protein submitochondria locations by hybridizing pseudo-amino acid composition with various physicochemical features of segmented sequence Journal: BMC BIOINFORMATICS, 7: art. no.-518 NOV 30 2006 Citations: 32 Authors: Du, PF;Li, YD Addresses:
Tsing Hua Univ, Bioinformat Div, TNLIST, Beijing 100084, Peoples R China
Tsing Hua Univ, Bioinformat Div, TNLIST, Beijing 100084, Peoples R China
Tsing Hua Univ, Dept Automat, Beijing 100084, Peoples R China
Label: Shen-2007 Title: Virus-PLoc: A fusion classifier for predicting the subcellular localization of viral proteins within host and virus-infected cells Journal: BIOPOLYMERS, 85 (3): 233-240 FEB 15 2007 Citations: 25 Authors: Shen, HB;Chou, KC Addresses:
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, 1954 Hua Shan Rd, Shanghai 200030, Peoples R China
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, Shanghai 200030, Peoples R China
Gordon Life Sci Inst, San Diego, CA 92130 USA
Label: Cai-2004 Title: Predicting subcellular localization of proteins in a hybridization space Journal: BIOINFORMATICS, 20 (7): 1151-1156 MAY 1 2004 Citations: 24 Authors: Cai, YD;Chou, KC Addresses:
UMIST, Biomol Sci Dept, POB 88, Manchester M60 1QD, Lancs, England
UMIST, Biomol Sci Dept, Manchester M60 1QD, Lancs, England
Gordon Life Sci Inst, San Diego, CA 92130 USA
TRIBD, Tianjin, Peoples R China
Label: Chou-2007 Title: MemType-2L: A Web server for predicting membrane proteins and their types by incorporating evolution information through Pse-PSSM Journal: BIOCHEM BIOPHYS RES COMMUN, 360 (2): 339-345 AUG 24 2007 Citations: 24 Authors: Chou, KC;Shen, HB Addresses:
Gordon Life Sci Inst, 13784 Torrey Del Mar Dr, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, Shanghai 200030, Peoples R China
Label: Lei-2005 Title: An SVM-based system for predicting protein subnuclear localizations Journal: BMC BIOINFORMATICS, 6: art. no.-291 DEC 7 2005 Citations: 24 Authors: Lei, ZD;Dai, Y Addresses:
Univ Illinois, Dept Bioengn MC063, 851 S Morgan St, Chicago, IL 60607 USA
Univ Illinois, Dept Bioengn MC063, Chicago, IL 60607 USA
Label: Guda-2005 Title: TARGET: a new method for predicting protein subcellular localization in eukaryotes Journal: BIOINFORMATICS, 21 (21): 3963-3969 NOV 1 2005 Citations: 22 Authors: Guda, C;Subramaniam, S Addresses:
SUNY Albany, GenNYsis Ctr Excellence Canc Genom, 1 Discovery Dr, Rensselaer, NY 12144 USA
SUNY Albany, GenNYsis Ctr Excellence Canc Genom, Rensselaer, NY 12144 USA
SUNY Albany, Dept Epidemiol & Biostat, Rensselaer, NY 12144 USA
Univ Calif San Diego, San Diego Supercomp Ctr, San Diego, CA USA
Univ Calif San Diego, Dept Bioengn, La Jolla, CA 92093 USA
Univ Calif San Diego, Dept Chem & Biochem, La Jolla, CA 92093 USA
Label: Shen-2007 Title: Gpos-PLoc: an ensemble classifier for predicting subcellular localization of Gram-positive bacterial proteins Journal: PROTEIN ENG DES SEL, 20 (1): 39-46 JAN 2007 Citations: 20 Authors: Shen, HB;Chou, KC Addresses:
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, 1954 Hua Shan Rd, Shanghai 200030, Peoples R China
Shanghai Jiao Tong Univ, Inst Image Proc & Pattern Recognit, Shanghai 200030, Peoples R China
Gordon Life Sci Inst, San Diego, CA 92130 USA
Label: Chou-2007 Title: Recent progress in protein subcellular location prediction Journal: ANAL BIOCHEM, 370 (1): 1-16 NOV 1 2007 Citations: 19 Authors: Chou, KC;Shen, HB Addresses:
Gordon Life Sci Inst, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USA
Label: Zhang-2006 Title: Prediction of protein subcellular location using hydrophobic patterns of amino acid sequence Journal: COMPUT BIOL CHEM, 30 (5): 367-371 OCT 2006 Citations: 13 Authors: Zhang, TL;Ding, YS;Chou, KC Addresses:
Donghua Univ, Bioinformat Res Ctr, Coll Informat Sci & Technol, Shanghai 201620, Peoples R China
Donghua Univ, Bioinformat Res Ctr, Coll Informat Sci & Technol, Shanghai 201620, Peoples R China
Gordon Life Sci Inst, San Diego, CA 92130 USA
Label: Xiao-2007 Title: Digital coding of amino acids based on hydrophobic index Journal: PROTEIN PEPTIDE LETT, 14 (9): 871-875 2007 Citations: 9 Authors: Xiao, X;Chou, KC Addresses:
Jing De Zhen Ceram Inst, Dept Comp, Jing De Zhen 33300, Peoples R China
Jing De Zhen Ceram Inst, Dept Comp, Jing De Zhen 33300, Peoples R China
Gordon Life Sci Inst, San Diego, CA 92130 USA
Label: Horton-2007 Title: WoLF PSORT: protein localization predictor Journal: NUCL ACID RES, 35: W585-W587 Suppl. S JUL 2007 Citations: 6 Authors: Horton, P;Park, KJ;Obayashi, T;Fujita, N;Harada, H;Adams-Collier, CJ;Nakai, K Addresses:
Univ Tokyo, Inst Med Sci, Ctr Human Genome, Tokyo, Japan
Univ Tokyo, Inst Med Sci, Ctr Human Genome, Tokyo, Japan
AIST, Computat Biol Res Ctr, Tokyo, Japan
Korea Ctr Dis Control & Prevent, Ctr Genome Sci, Natl Inst Hlth, Seoul 122701, South Korea
Collier Technol, Everett, WA USA
Label: Chou-2008 Title: Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms Journal: NAT PROTOC, 3 (2): 153-162 2008 Citations: 3 Authors: Chou, KC;Shen, HB Addresses:
Gordon Life Sci Inst, 13784 Torrey Mar Dr, San Diego, CA 92130 USA
Gordon Life Sci Inst, San Diego, CA 92130 USA
Harvard Univ, Sch Med, Dept Biol Chem & Mol Pharmacol, Boston, MA 02115 USA
Label: Diao-2008 Title: Using pseudo amino acid composition to predict transmembrane regions in protein: cellular automata and Lempel-Ziv complexity Journal: AMINO ACIDS, 34 (1): 111-117 JAN 2008 Citations: 3 Authors: Diao, Y;Ma, D;Wen, Z;Yin, J;Xiang, J;Li, M Addresses:
Sichuan Univ, Coll Chem, Chengdu 610064, Peoples R China
Sichuan Univ, Coll Chem, Chengdu 610064, Peoples R China
Sichuan Univ, State Key Lab Biotherapy, Chengdu 610064, Sichuan, Peoples R China
KEYWORDS: SVM BASED PROTEIN
SUBCELLULAR LOCALIZATION PREDICTION USING MULTIPLE PHYSICOCHEMICAL PROPERTIES;
PREDICTING HUMAN PROTEIN SUBCELLULAR LOCALIZATION; PROTEIN SUBCELLULAR
LOCALIZATION USING N-TERMINAL TARGETING SEQUENCES. [5527]
Top Topics : 2008 : Oct. 2008 - PROTEIN SUBCELLULAR LOCALIZATION - Research Front Map