Science Watch® - Tracking Trends and Performance in Basic Research
July/August 2005


Elation Over Depression Research on Genes and Environment by Jeremy Cherfas
WHAT'S HOT IN BIOLOGY
Rank      Paper Citations This Period (Jan-Feb 05) Rank Last Period (Nov-Dec 04)
1  B. Boeckmann, et al., "The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003," Nucl. Acids Res., 31(1): 365-70, 1 January 2003. [Swiss Inst. Bioinformatics, Geneva; EMBL-Europ. Bioinformatics Inst., Cambridge, U.K.] *647EP 66 6
2 M. Zuker, et al., "Mfold web server for nucleic acid folding and hybridization prediction," Nucl. Acids Res., 31(13): 3406-15, 1 July 2003. [Rensselaer Polytech. Inst., Troy, NY] *695LT  58 1
3 A. Caspi, et al., "Influence of life stress on depression: Moderation by a polymorphism in the 5-HTT gene," Science, 301(5631): 386-9, 18 July 2003. [King’s College London, U.K.; U. Wisconsin, Madison; U. Otago, Dunedin, New Zealand] *702CG 55  55
4  T. Schwede, et al., "SWISS-MODEL: an automated protein homology-modeling server," Nucl. Acids Res., 31(13): 3381-5, 1 July 2003. [U. Basel, Switzerland; Swiss Inst. Bioinformatics, Basel; Novartis AG, Basel; GlaxoSmithKline, Research Triangle Park, NC] *695LT 47 2
5  W.-K. Huh, et al., "Global analysis of protein localization in budding yeast," Nature, 425(6959): 686-91, 16 October 2003. [U. Calif. San Francisco, Howard Hughes Med. Inst., San Francisco, CA] *732DA 46 9
6  R.A. Gibbs, et al. (The International HapMap Consortium), "The International HapMap Project", Nature, 426(6968): 789-96, 18/25 December 2003. [74 institutions worldwide] *754QM 45
7  J.M. Alonso, et al., "Genome-wide insertional mutagenesis of Arabidopsis thaliana," Science, 301(5633): 653-7, 1 August 2003. [Salk Inst. Biol. Stud., La Jolla, CA; Plant Biotech. Inst., Saskatoon, Canada; U. Calif., San Diego] *706UN 39
8  R.A. Gibbs, et al. (Rat Genome Sequencing Project Consort.), "Genome sequence of the Brown Norway rat yields insights into mammalian evolution," Nature, 428(6982): 493-521, 1 April 2004. [40 institutions worldwide] *807ZT 38 5
9  K.N. Ferreira, et al., "Architecture of the photosynthetic oxygen-evolving center," Science, 303(5665): 1831-8, 19 March 2004. [Imperial Coll., London, U.K.; Japan Sci. Tech. Corp., Nagatsuta] *804EI 37 4
10  Y.-X. Jiang, et al., "X-ray structure of a voltage-dependent K+ channel," Nature, 423(6935): 33-41, 1 May 2003. [Howard Hughes Med. Inst., Rockefeller U., New York, NY] *673CG 35
SOURCE: ISI’s Hot Papers DatabaseRead  the Legend.

Depression and anxiety will afflict between one in ten and one in five people over the course of their lives, making these among the most common public-health problems. Arguments about causes have raged. Certain life events, such as threat, loss, and humiliation, can trigger depression, but not all who experience such events succumb. There is also a genetic component, an inherited tendency to develop depression after stressful life events. The truth, as revealed in the paper at #3, is more complicated: a strong interaction between genes and environment.

A team led by Terrie Moffitt, of the Institute of Psychiatry, King’s College, London, looked at the development of depression after stressful life events among 847 people who had been enrolled in the Dunedin Multidisciplinary Health and Development Study. This representative birth cohort of New Zealanders has been studied in detail for almost 30 years. Moffitt’s group looked at their experiences of stressful life events between the ages of 21 and 26 and their experience of depression in the year before the study. They also grouped the subjects according to their genotype, in particular their alleles of the promoter region of the serotonin transporter gene 5-HTT. A short version of the promoter is associated with less-efficient transcription of the gene, and in experimental animals is linked to more fearful and anxious behavior. In humans, drugs that increase the amount of serotonin alleviate the symptoms of depression.

In the study group, 17% were homozygous for the short allele, 51% were heterozygous with one short and one long allele, and 31% were homozygous for the long allele. While there was no difference among the groups for the number of stressful life events experienced, there was a clear effect on depression. People with two short alleles were much more likely to suffer a major depressive episode than people with two long alleles. Heterozygotes fell roughly in the middle. The effect on thoughts of suicide was even stronger.

"It was such a wonderful result we all thought it couldn’t possibly be true," Professor Guy Goodwin, Head of the Department of Psychiatry at Oxford University, tells Science Watch. In paper #3, Crespi et al were equally circumspect. "Until this study’s findings are replicated," they wrote, "speculation about clinical implications is premature."

"Much to their surprise," said Goodwin, studies have now replicated the result. (See, for example, K.S. Kendler, et al., "The interaction of stressful life events and a serotonin transporter polymorphism in the prediction of episodes of major depression: a replication," Arch. Gen. Psychiat., 62[5]:529-35, 2005.)

The interaction between genotype and environment uncovered by Moffitt’s group makes sense of the failure previously to find strong links between genes and psychiatric disorders such as depression, probably because earlier studies did not look in detail at stressful life events. A gene may have effects only on family members exposed to particular events. Likewise, if different individuals in a sample experience different stresses, the effects of the gene may be masked. Moffitt suggests that the variant form of the 5-HTT promoter protects its owner from environmental pathogens, like many other variant genes present in populations at high levels. However, she extends the notion of environmental pathogens to encompass "traumatic, stressful life experiences" and speculates that some multifactorial disorders, which people had previously assumed to be caused by variations in many genes with small effects, may instead be caused by fewer genes but be conditional on environmental factors.

Another hot paper, hovering outside the list at #12, sheds light on an intriguing aspect of treatment for depression (L. Santarelli, et al., Science, 301[5634]: 805-9, 2003; 35 citations this period, 123 overall). Antidepressants such as fluoxetine (better known as Prozac) take three or four weeks to have an appreciable clinical effect. The favored explanation is that these drugs stimulate the growth of new brain cells, and that takes time. René Hen, of Columbia University in New York, and his colleagues conducted a series of experiments that demonstrate beyond doubt that, in mice at least, nerve-cell growth in the area of the brain called the hippocampus is a prerequisite for the behavioral effects of antidepressant drugs. This result does not prove that lack of nerve growth causes depression, or that increased nerve growth cures it. Discovering just exactly how environmental triggers interact with 5-HTT promoter variants, and how in turn that may affect the treatment of depression, is driving the citation of these two hot papers.end

Dr. Jeremy Cherfas is Science Writer at the
International Plant Genetic Resources Institute, Rome, Italy.

by Terrie Moffitt on paper at #3 above.
View the top 10 scientists and/or top 3 Hot Papers in Biology & Biochemistry; for the period of January 1, 1995-February 28, 2005.
Science Watch®, July/August 2005, Vol. 16, No. 4
Citing URL: http://www.sciencewatch.com/july-aug2005/sw_july-aug2005_page
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