Science Watch® - Tracking Trends and Performance in Basic Research
March/April 2000


Colorful Diagnostics: There's gold in them thar ills by John Emsley


WHAT'S HOT IN CHEMISTRY...

Rank Paper Citations
This
Period
Nov-Dec
99
Rank
Last Period
Sep-Oct
99
1 A.T. Brünger, et al., "Crystallography & NMR System: a new software suite for macromolecular structure determination," Acta Cryst. D, 54:905-21, 1 September 1998. [10 institutions worldwide] *120JA 64 1
2 J.W.G. Wildöer, et al., "Electronic structure of atomically resolved carbon nanotubes," Nature, 391(6662):59-62, 1 January 1998. [Delft U. Technol., Netherlands; Rice U., Houston, TX] *YP888 20 3
3 T.W. Odom, et al., "Atomic structure and electronic properties of single-walled carbon nanotubes," Nature, 391(6662):62-4, 1 January 1998. [Harvard U., Cambridge, MA] *YP888 18 2
4 N.C. Guex, M.C. Peitsch, "SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling," Electrophoresis, 18(15):2714-23, December 1997. [Glaxo Wellcome Res., Geneva, Switzerland] *YW557 15 6
5 J.J. Storhoff, et al., "One-pot colorimetric differentiation of polynucleotides with single base imperfections using gold nanoparticle probes," J. Amer. Chem. Soc., 120(9):1959-64, 11 March 1998. [Northwestern U., Evanston, IL] *ZB703 10
6 A.J. Dingley, S. Grzesiek, "Direct observations of hydrogen bonds in nucleic acid base pairs by internucleotide 2JNN couplings," J. Amer. Chem. Soc., 120(33):8293-7, 26 August 1998. [Heinrich Heine U., Dusseldorf, Germany; KFA Julich, Germany] *114PX 9
7 G.J.P. Britovsek, et al. "Novel olefin polymerization catalysts based on iron and cobalt," Chem. Comm., (7):849-50, 7 April 1998. [Imperial Coll., London, U.K.; BP Chem., Sunbury on Thames, U.K.] *ZG813 8
8 M.P. Coles, et al., "Synthesis and structures of mono- and bis(amidinate) complexes of aluminum," Organometallics, 16(24):5183-94, 25 November 1997. [U. Iowa, Iowa City; U. Minnesota, Minneapolis] *YJ376 7
9 J. Clayden, "Stereocontrol with rotationally restricted amides," Synlett, (8):810-6, August 1998. [U. Manchester, U.K.] *113YN 7
10 H. Sakai, et al., "Controlling the alignment of neutral molecules by a strong laser field," J. Chem. Phys., 110(21):10235-8, 1 June 1999. [U. Arhus, Denmark] *197MT 7
SOURCE: ISI’s Hot Papers DatabaseRead  the Legend.

I

magine if a doctor could do a simple color-change test that in seconds would diagnose whether a patient had cancer, or a hereditary malfunction, or infection from a microbial pathogen. However, if the test involved using gold, the doctor might wonder if it would be too expensive to become part of his or her medical armory. In fact such tests will soon be possible and cheap to carry out, thanks to the group responsible for paper #5 in the current Hot Ten. (In fact, the cost will be less than 10 cents, because an ounce of gold will provide enough material for thousands of tests.

   The reason is that gold will be in the form of tiny nanospheres, and this is the key to paper #5, which reports an entirely new way of detecting faulty strands of DNA. This is the extraordinary outcome of collaborative work between chemist Chad Mirkin and his team based at Northwestern University, Evanston, Illinois, and their Northwestern colleague Robert Letsinger, a pioneer in solid-phase synthesis and nucleic acid chemistry. They have come up with what promises to be the standard way of diagnosing most life-threatening illnesses.

   The nano-sized gold particles carry short strands of artificial DNA (oligonucleotides) tailored to match known segments of biological DNA that are implicated in, or linked to, disease. The oligonucleotides, made up of 24 bases, are attached to the minute gold particles, which are about 13 nanometers (13 x 10-9 m) in diameter, via a sulfur atom.

   When such a molecule probe finds its target DNA, the two interact and the result is the formation of a polymeric cluster which affects its plasmon resonance, and there is a dramatic color change from red to blue. Not only that, but the change is reversible and the temperature at which this occurs is quite specific, much more so than with conventional DNA mutation probes, again offering a sensitivity that adds to the certainty of correct identification. This "melting transition" can be monitored at 260 or 700 nm. Paper #5 describes how this one-pot color-change method can identify the target even when it is in the presence of other strands with base imperfections.

   The method is so sensitive that it can detect a mutant strand of DNA which has one wrong base, regardless of where the rogue base is located. Not surprisingly, paper #5 is attracting a lot of attention, being of interest not only to chemists but to medics and especially those working in the area of DNA detection. it points the way to a whole new method of medical diagnosis based on identifying defective genetic material or correct sequences that are associated with a specific disease.

   What makes the method so exciting is that the tests can be carried out without the need for expensive equipment or specialist personnel. More importantly, it eliminates the need to use radioactive nuclides with their associated problems, such as short shelf-lives and the need for careful disposal.

   Mirkin's research first began to attract attention with the paper he and his collaborators published four years ago in Nature (see C.A. Mirkin et al., 382:607-9 , 1996), which opened up the field of using nanoparticles as biomolecular detectors. The potential to diagnose threats from all sources has led to a wide spectrum of funding agencies supporting his work: the National Science Foundation, the National Institutes of Health, the Army Research Office, Office of Naval Research, and the Air Force Office of Scientific Research.

   Currently Mirkin is working on building other nanosphere architectures, using genetic coding to program their formation. Meanwhile, with Letsinger he has founded Nanospheres, Inc., a start-up company that promises to revolutionize the $10 billion-a-year medical diagnostics industry by offering in vitro DNA screening probes for cancer detection and genetic disease. The company has already developed successful prototypes for detecting TB, a disease which is again spreading throughout the world, and anthrax, which is seen as a potent biological warfare agent. The attraction of Mirkin and Letsinger's gold-DNA test is that it is cheap, quick, easy, reliable, and accurate. A combination of benefits that is difficult to beat!end

Dr. John Emsley is Science Writer in Residence
at the Department of Chemistry, University of Cambridge, U.K.


Science Watch®, March/April 2000, Vol. 11, No. 2
Citing URL: http://www.sciencewatch.com/march-april2000/sw_march-april2000_page7.htm

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